Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col16a1Q8BLX7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col16a1Q8BLX7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
Col16a1Q8BLX7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC24.17■■□□□ 1.46
Col16a1Q8BLX7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col16a1Q8BLX7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col16a1Q8BLX7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC24.17■■□□□ 1.46
Col16a1Q8BLX7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Col16a1Q8BLX7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Col16a1Q8BLX7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC24.16■■□□□ 1.46
Col16a1Q8BLX7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col16a1Q8BLX7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Col16a1Q8BLX7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Col16a1Q8BLX7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Col16a1Q8BLX7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Col16a1Q8BLX7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Col16a1Q8BLX7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Col16a1Q8BLX7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Col16a1Q8BLX7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC24.14■■□□□ 1.45
Col16a1Q8BLX7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Col16a1Q8BLX7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Ank2-226ENSMUST00000189368 339 ntBASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Col16a1Q8BLX7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 AC154471.1-201ENSMUST00000224418 436 ntBASIC24.11■■□□□ 1.45
Col16a1Q8BLX7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms