Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cpne4Q8BLR2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne4Q8BLR2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne4Q8BLR2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Gm22325-201ENSMUST00000158904 308 ntBASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.32■□□□□ 0.2
Cpne4Q8BLR2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne4Q8BLR2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Gm44549-201ENSMUST00000208351 577 ntBASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne4Q8BLR2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne4Q8BLR2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms