Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 AW822252-206ENSMUST00000208904 237 ntBASIC15.56■□□□□ 0.08
Smg1Q8BKX6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smg1Q8BKX6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smg1Q8BKX6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Mtag2-201ENSMUST00000058665 714 ntBASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smg1Q8BKX6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Smg1Q8BKX6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Smg1Q8BKX6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Smg1Q8BKX6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Gm18669-201ENSMUST00000216049 778 ntBASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Smg1Q8BKX6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Gm17807-201ENSMUST00000186869 298 ntBASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Gm6443-201ENSMUST00000203599 874 ntBASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Flg-201ENSMUST00000050758 1488 ntBASIC15.5■□□□□ 0.07
Smg1Q8BKX6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smg1Q8BKX6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Smg1Q8BKX6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smg1Q8BKX6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Smg1Q8BKX6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smg1Q8BKX6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smg1Q8BKX6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Smg1Q8BKX6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Smg1Q8BKX6 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms