Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
Tdp1Q8BJ37 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Mir6349-201ENSMUST00000184059 97 ntBASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tdp1Q8BJ37 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Gm12382-201ENSMUST00000122005 922 ntBASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.18■□□□□ 0.82
Tdp1Q8BJ37 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.17■□□□□ 0.82
Tdp1Q8BJ37 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tdp1Q8BJ37 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Odf3b-204ENSMUST00000227834 930 ntBASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tdp1Q8BJ37 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Gm11539-201ENSMUST00000119837 557 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Gm13436-201ENSMUST00000120418 567 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Gm13559-201ENSMUST00000120476 863 ntBASIC20.14■□□□□ 0.81
Tdp1Q8BJ37 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms