Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf38Q8BI21 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf38Q8BI21 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf38Q8BI21 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.57■□□□□ 0.4
Rnf38Q8BI21 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.57■□□□□ 0.4
Rnf38Q8BI21 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Reep4-203ENSMUST00000226563 1444 ntBASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf38Q8BI21 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf38Q8BI21 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Gm13146-201ENSMUST00000118508 780 ntBASIC17.54■□□□□ 0.4
Rnf38Q8BI21 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf38Q8BI21 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms