Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Gm30025-201ENSMUST00000218555 728 ntBASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp6nlQ80XC3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Odf3b-204ENSMUST00000227834 930 ntBASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp6nlQ80XC3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp6nlQ80XC3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Gm13559-201ENSMUST00000120476 863 ntBASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Usp6nlQ80XC3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp6nlQ80XC3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Mir6349-201ENSMUST00000184059 97 ntBASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Gm3375-201ENSMUST00000203929 796 ntBASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp6nlQ80XC3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Gm11539-201ENSMUST00000119837 557 ntBASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Gm13436-201ENSMUST00000120418 567 ntBASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp6nlQ80XC3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms