Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Gm27463-201ENSMUST00000183569 57 ntBASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnrc18Q80WC3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnrc18Q80WC3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Tnrc18Q80WC3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Tnrc18Q80WC3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnrc18Q80WC3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnrc18Q80WC3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnrc18Q80WC3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tnrc18Q80WC3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnrc18Q80WC3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnrc18Q80WC3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnrc18Q80WC3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Gm5587-201ENSMUST00000206270 674 ntBASIC18.31■□□□□ 0.52
Tnrc18Q80WC3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnrc18Q80WC3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Mir5130-201ENSMUST00000175160 84 ntBASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnrc18Q80WC3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnrc18Q80WC3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms