Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Gm44549-201ENSMUST00000208351 577 ntBASIC18.26■□□□□ 0.51
Rpp38Q80UU2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpp38Q80UU2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rpp38Q80UU2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Gm10602-201ENSMUST00000098239 609 ntBASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpp38Q80UU2 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.22■□□□□ 0.51
Rpp38Q80UU2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpp38Q80UU2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.2■□□□□ 0.5
Rpp38Q80UU2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rpp38Q80UU2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms