Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh19Q80TF3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh19Q80TF3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh19Q80TF3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh19Q80TF3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.89■□□□□ 0.46
Pcdh19Q80TF3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Pcdh19Q80TF3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Pcdh19Q80TF3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh19Q80TF3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdh19Q80TF3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh19Q80TF3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Gm11927-201ENSMUST00000118472 759 ntBASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh19Q80TF3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh19Q80TF3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms