Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf38bQ80SY5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf38bQ80SY5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf38bQ80SY5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf38bQ80SY5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf38bQ80SY5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf38bQ80SY5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf38bQ80SY5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf38bQ80SY5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf38bQ80SY5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.01■□□□□ 0.63
Prpf38bQ80SY5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38bQ80SY5 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Gm18101-201ENSMUST00000215769 548 ntBASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38bQ80SY5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms