Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Gm18284-201ENSMUST00000172604 624 ntBASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ctdp1Q7TSG2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Gm11421-201ENSMUST00000122124 294 ntBASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ctdp1Q7TSG2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Gm8495-201ENSMUST00000188740 694 ntBASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ctdp1Q7TSG2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.85■□□□□ 0.77
Ctdp1Q7TSG2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ctdp1Q7TSG2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ctdp1Q7TSG2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms