Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub1Q7TQI3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub1Q7TQI3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub1Q7TQI3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub1Q7TQI3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Otub1Q7TQI3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Otub1Q7TQI3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Otub1Q7TQI3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Otub1Q7TQI3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Otub1Q7TQI3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.33■□□□□ 0.37
Otub1Q7TQI3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Otub1Q7TQI3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Gm13234-201ENSMUST00000120010 747 ntBASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.32■□□□□ 0.36
Otub1Q7TQI3 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.32■□□□□ 0.36
Otub1Q7TQI3 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Otub1Q7TQI3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms