Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rfx4Q7TNK1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rfx4Q7TNK1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rfx4Q7TNK1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx4Q7TNK1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx4Q7TNK1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfx4Q7TNK1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx4Q7TNK1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Gm14117-201ENSMUST00000122417 843 ntBASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx4Q7TNK1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx4Q7TNK1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Rps24-207ENSMUST00000224568 714 ntBASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx4Q7TNK1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rfx4Q7TNK1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms