Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Mir1199-201ENSMUST00000117015 119 ntBASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Gm9194-201ENSMUST00000220749 1447 ntBASIC22.63■■□□□ 1.21
Ddx58Q6Q899 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx58Q6Q899 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Gm15375-201ENSMUST00000119510 849 ntBASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx58Q6Q899 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx58Q6Q899 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx58Q6Q899 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx58Q6Q899 Mir6982-201ENSMUST00000184354 68 ntBASIC22.61■■□□□ 1.21
Ddx58Q6Q899 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx58Q6Q899 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Ddx58Q6Q899 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx58Q6Q899 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Gm29241-201ENSMUST00000189260 1096 ntBASIC22.6■■□□□ 1.21
Ddx58Q6Q899 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Gm45560-201ENSMUST00000211492 1472 ntBASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx58Q6Q899 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Gm715-201ENSMUST00000117865 831 ntBASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.59■■□□□ 1.21
Ddx58Q6Q899 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx58Q6Q899 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx58Q6Q899 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.58■■□□□ 1.21
Ddx58Q6Q899 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx58Q6Q899 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx58Q6Q899 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.58■■□□□ 1.21
Ddx58Q6Q899 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ddx58Q6Q899 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx58Q6Q899 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx58Q6Q899 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.57■■□□□ 1.2
Ddx58Q6Q899 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.57■■□□□ 1.2
Ddx58Q6Q899 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ddx58Q6Q899 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx58Q6Q899 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ddx58Q6Q899 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Mir6349-201ENSMUST00000184059 97 ntBASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Gm18025-201ENSMUST00000221733 862 ntBASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx58Q6Q899 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms