Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rad54bQ6PFE3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rad54bQ6PFE3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.38■□□□□ 0.53
Rad54bQ6PFE3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rad54bQ6PFE3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rad54bQ6PFE3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rad54bQ6PFE3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rad54bQ6PFE3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Gm15039-201ENSMUST00000118914 875 ntBASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rad54bQ6PFE3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rad54bQ6PFE3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rad54bQ6PFE3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rad54bQ6PFE3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rad54bQ6PFE3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rad54bQ6PFE3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.32■□□□□ 0.52
Rad54bQ6PFE3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.31■□□□□ 0.52
Rad54bQ6PFE3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rad54bQ6PFE3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.31■□□□□ 0.52
Rad54bQ6PFE3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.31■□□□□ 0.52
Rad54bQ6PFE3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rad54bQ6PFE3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Rad54bQ6PFE3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rad54bQ6PFE3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.3■□□□□ 0.52
Rad54bQ6PFE3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms