Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtifQ6PEE2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.47■□□□□ 0.71
CtifQ6PEE2 Gm15820-201ENSMUST00000201566 728 ntBASIC19.47■□□□□ 0.71
CtifQ6PEE2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtifQ6PEE2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CtifQ6PEE2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtifQ6PEE2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtifQ6PEE2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtifQ6PEE2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CtifQ6PEE2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CtifQ6PEE2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtifQ6PEE2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Tgds-204ENSMUST00000228543 1594 ntBASIC19.46■□□□□ 0.71
CtifQ6PEE2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CtifQ6PEE2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
CtifQ6PEE2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.45■□□□□ 0.7
CtifQ6PEE2 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.45■□□□□ 0.7
CtifQ6PEE2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CtifQ6PEE2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CtifQ6PEE2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CtifQ6PEE2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CtifQ6PEE2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
CtifQ6PEE2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CtifQ6PEE2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CtifQ6PEE2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.42■□□□□ 0.7
CtifQ6PEE2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.42■□□□□ 0.7
CtifQ6PEE2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CtifQ6PEE2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CtifQ6PEE2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtifQ6PEE2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtifQ6PEE2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CtifQ6PEE2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CtifQ6PEE2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms