Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dhx40Q6PE54 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Dhx40Q6PE54 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dhx40Q6PE54 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dhx40Q6PE54 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Dhx40Q6PE54 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dhx40Q6PE54 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Dhx40Q6PE54 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dhx40Q6PE54 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dhx40Q6PE54 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Dhx40Q6PE54 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms