Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Gm13148-201ENSMUST00000118892 745 ntBASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Gm6211-202ENSMUST00000167849 925 ntBASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcc2Q6PDG5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Smarcc2Q6PDG5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smarcc2Q6PDG5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smarcc2Q6PDG5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smarcc2Q6PDG5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcc2Q6PDG5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcc2Q6PDG5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcc2Q6PDG5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcc2Q6PDG5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.25■□□□□ 0.99
Smarcc2Q6PDG5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcc2Q6PDG5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smarcc2Q6PDG5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 Gm5408-201ENSMUST00000197998 747 ntBASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.24■□□□□ 0.99
Smarcc2Q6PDG5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.23■□□□□ 0.99
Smarcc2Q6PDG5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms