Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Dio3-201ENSMUST00000097228 1449 ntBASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hmgb4Q6P8W9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Gm5643-201ENSMUST00000117081 966 ntBASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgb4Q6P8W9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.05■□□□□ 0.64
Hmgb4Q6P8W9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgb4Q6P8W9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Gm2399-201ENSMUST00000104944 225 ntBASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Hmgb4Q6P8W9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Gm11249-201ENSMUST00000117071 859 ntBASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgb4Q6P8W9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hmgb4Q6P8W9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmgb4Q6P8W9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Hmgb4Q6P8W9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms