Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Abcf1Q6P542 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Abcf1Q6P542 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Abcf1Q6P542 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Gm18671-201ENSMUST00000214826 683 ntBASIC20.39■□□□□ 0.85
Abcf1Q6P542 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Abcf1Q6P542 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Abcf1Q6P542 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.38■□□□□ 0.85
Abcf1Q6P542 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Abcf1Q6P542 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Abcf1Q6P542 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Abcf1Q6P542 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Abcf1Q6P542 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.35■□□□□ 0.85
Abcf1Q6P542 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Abcf1Q6P542 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms