Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Snrnp200Q6P4T2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Snrnp200Q6P4T2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snrnp200Q6P4T2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Snrnp200Q6P4T2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snrnp200Q6P4T2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.27■□□□□ 0.35
Snrnp200Q6P4T2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snrnp200Q6P4T2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.27■□□□□ 0.35
Snrnp200Q6P4T2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snrnp200Q6P4T2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Snrnp200Q6P4T2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snrnp200Q6P4T2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snrnp200Q6P4T2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snrnp200Q6P4T2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp200Q6P4T2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snrnp200Q6P4T2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.22■□□□□ 0.35
Snrnp200Q6P4T2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Snrnp200Q6P4T2 Gm10698-201ENSMUST00000182663 604 ntBASIC17.22■□□□□ 0.35
Snrnp200Q6P4T2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.22■□□□□ 0.35
Snrnp200Q6P4T2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms