Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Gm15039-201ENSMUST00000118914 875 ntBASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Gm7291-201ENSMUST00000199147 382 ntBASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hdac4Q6NZM9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.42■□□□□ 0.86
Hdac4Q6NZM9 Fst-202ENSMUST00000223640 2612 ntBASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hdac4Q6NZM9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.4■□□□□ 0.86
Hdac4Q6NZM9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Hdac4Q6NZM9 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.39■□□□□ 0.86
Hdac4Q6NZM9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac4Q6NZM9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hdac4Q6NZM9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hdac4Q6NZM9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hdac4Q6NZM9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms