Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tpm4Q6IRU2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tpm4Q6IRU2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tpm4Q6IRU2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tpm4Q6IRU2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm4Q6IRU2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm4Q6IRU2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm4Q6IRU2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tpm4Q6IRU2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tpm4Q6IRU2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Gm45417-201ENSMUST00000209533 758 ntBASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tpm4Q6IRU2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Gm43017-201ENSMUST00000198296 752 ntBASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tpm4Q6IRU2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm4Q6IRU2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.36■□□□□ 0.85
Tpm4Q6IRU2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tpm4Q6IRU2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm4Q6IRU2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tpm4Q6IRU2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms