Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pcdhga7Q6DD96 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhga7Q6DD96 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhga7Q6DD96 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pcdhga7Q6DD96 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhga7Q6DD96 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Gm13234-201ENSMUST00000120010 747 ntBASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhga7Q6DD96 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga7Q6DD96 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga7Q6DD96 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.64■□□□□ 0.42
Pcdhga7Q6DD96 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.64■□□□□ 0.42
Pcdhga7Q6DD96 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhga7Q6DD96 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhga7Q6DD96 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms