Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ltn1Q6A009 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ltn1Q6A009 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ltn1Q6A009 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ltn1Q6A009 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ltn1Q6A009 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.81■■□□□ 1.08
Ltn1Q6A009 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.81■■□□□ 1.08
Ltn1Q6A009 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.81■■□□□ 1.08
Ltn1Q6A009 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.81■■□□□ 1.08
Ltn1Q6A009 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ltn1Q6A009 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ltn1Q6A009 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Gm23634-201ENSMUST00000175071 91 ntBASIC21.8■■□□□ 1.08
Ltn1Q6A009 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Ltn1Q6A009 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Gm12085-201ENSMUST00000119263 940 ntBASIC21.79■■□□□ 1.08
Ltn1Q6A009 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ltn1Q6A009 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ltn1Q6A009 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ltn1Q6A009 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ltn1Q6A009 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ltn1Q6A009 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.77■■□□□ 1.08
Ltn1Q6A009 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ltn1Q6A009 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.77■■□□□ 1.08
Ltn1Q6A009 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ltn1Q6A009 Gm6345-202ENSMUST00000180900 204 ntBASIC21.76■■□□□ 1.07
Ltn1Q6A009 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.76■■□□□ 1.07
Ltn1Q6A009 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ltn1Q6A009 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Gm10013-201ENSMUST00000106074 672 ntBASIC21.75■■□□□ 1.07
Ltn1Q6A009 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ltn1Q6A009 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.74■■□□□ 1.07
Ltn1Q6A009 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ltn1Q6A009 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ltn1Q6A009 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ltn1Q6A009 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ltn1Q6A009 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms