Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC22.37■■□□□ 1.17
Col11a2Q64739 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Col11a2Q64739 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC22.37■■□□□ 1.17
Col11a2Q64739 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC22.37■■□□□ 1.17
Col11a2Q64739 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a2Q64739 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.37■■□□□ 1.17
Col11a2Q64739 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a2Q64739 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a2Q64739 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col11a2Q64739 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Col11a2Q64739 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC22.36■■□□□ 1.17
Col11a2Q64739 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 Gm22697-201ENSMUST00000175194 63 ntBASIC22.36■■□□□ 1.17
Col11a2Q64739 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC22.36■■□□□ 1.17
Col11a2Q64739 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Col11a2Q64739 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col11a2Q64739 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC22.35■■□□□ 1.17
Col11a2Q64739 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Col11a2Q64739 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC22.35■■□□□ 1.17
Col11a2Q64739 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col11a2Q64739 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.35■■□□□ 1.17
Col11a2Q64739 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col11a2Q64739 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col11a2Q64739 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col11a2Q64739 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col11a2Q64739 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col11a2Q64739 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC22.34■■□□□ 1.17
Col11a2Q64739 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col11a2Q64739 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col11a2Q64739 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Col11a2Q64739 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col11a2Q64739 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Col11a2Q64739 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col11a2Q64739 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Col11a2Q64739 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Col11a2Q64739 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col11a2Q64739 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col11a2Q64739 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Col11a2Q64739 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Col11a2Q64739 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Col11a2Q64739 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Col11a2Q64739 Gm17661-201ENSMUST00000170317 270 ntBASIC22.33■■□□□ 1.17
Col11a2Q64739 Gm2274-201ENSMUST00000184539 609 ntBASIC22.33■■□□□ 1.17
Col11a2Q64739 Gm7461-201ENSMUST00000058918 827 ntBASIC22.33■■□□□ 1.17
Col11a2Q64739 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col11a2Q64739 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col11a2Q64739 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Col11a2Q64739 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col11a2Q64739 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.33■■□□□ 1.16
Col11a2Q64739 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col11a2Q64739 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col11a2Q64739 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Col11a2Q64739 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC22.32■■□□□ 1.16
Col11a2Q64739 Gm28033-201ENSMUST00000184224 96 ntBASIC22.32■■□□□ 1.16
Col11a2Q64739 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.32■■□□□ 1.16
Col11a2Q64739 Gm7370-201ENSMUST00000219471 767 ntBASIC22.32■■□□□ 1.16
Col11a2Q64739 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.32■■□□□ 1.16
Col11a2Q64739 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col11a2Q64739 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Col11a2Q64739 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Col11a2Q64739 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col11a2Q64739 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col11a2Q64739 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col11a2Q64739 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC22.31■■□□□ 1.16
Col11a2Q64739 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.31■■□□□ 1.16
Col11a2Q64739 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.31■■□□□ 1.16
Col11a2Q64739 Gm16061-201ENSMUST00000122167 857 ntBASIC22.31■■□□□ 1.16
Col11a2Q64739 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Col11a2Q64739 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC22.31■■□□□ 1.16
Col11a2Q64739 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC22.31■■□□□ 1.16
Col11a2Q64739 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col11a2Q64739 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col11a2Q64739 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col11a2Q64739 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col11a2Q64739 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col11a2Q64739 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col11a2Q64739 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col11a2Q64739 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col11a2Q64739 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Col11a2Q64739 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.29■■□□□ 1.16
Col11a2Q64739 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col11a2Q64739 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms