Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
VclQ64727 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
VclQ64727 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VclQ64727 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VclQ64727 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VclQ64727 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VclQ64727 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.95■□□□□ 0.46
VclQ64727 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.95■□□□□ 0.46
VclQ64727 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VclQ64727 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.95■□□□□ 0.46
VclQ64727 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.95■□□□□ 0.46
VclQ64727 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VclQ64727 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VclQ64727 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VclQ64727 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
VclQ64727 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VclQ64727 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VclQ64727 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VclQ64727 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
VclQ64727 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.94■□□□□ 0.46
VclQ64727 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VclQ64727 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VclQ64727 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VclQ64727 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VclQ64727 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.94■□□□□ 0.46
VclQ64727 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VclQ64727 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VclQ64727 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
VclQ64727 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.93■□□□□ 0.46
VclQ64727 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.93■□□□□ 0.46
VclQ64727 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
VclQ64727 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.93■□□□□ 0.46
VclQ64727 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
VclQ64727 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.92■□□□□ 0.46
VclQ64727 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
VclQ64727 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
VclQ64727 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.92■□□□□ 0.46
VclQ64727 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VclQ64727 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
VclQ64727 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.91■□□□□ 0.46
VclQ64727 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VclQ64727 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.91■□□□□ 0.46
VclQ64727 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.91■□□□□ 0.46
VclQ64727 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
VclQ64727 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.91■□□□□ 0.46
VclQ64727 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VclQ64727 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VclQ64727 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VclQ64727 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.9■□□□□ 0.46
VclQ64727 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.9■□□□□ 0.46
VclQ64727 Gm44549-201ENSMUST00000208351 577 ntBASIC17.9■□□□□ 0.46
VclQ64727 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.9■□□□□ 0.46
VclQ64727 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.9■□□□□ 0.46
VclQ64727 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
VclQ64727 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VclQ64727 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms