Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Col7a1Q63870 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col7a1Q63870 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col7a1Q63870 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col7a1Q63870 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col7a1Q63870 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.31■□□□□ 0.04
Col7a1Q63870 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col7a1Q63870 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col7a1Q63870 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col7a1Q63870 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col7a1Q63870 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.3■□□□□ 0.04
Col7a1Q63870 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col7a1Q63870 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col7a1Q63870 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col7a1Q63870 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col7a1Q63870 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Col7a1Q63870 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col7a1Q63870 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col7a1Q63870 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col7a1Q63870 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col7a1Q63870 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col7a1Q63870 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.29■□□□□ 0.04
Col7a1Q63870 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col7a1Q63870 Gm13474-201ENSMUST00000122466 815 ntBASIC15.28■□□□□ 0.04
Col7a1Q63870 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.28■□□□□ 0.04
Col7a1Q63870 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col7a1Q63870 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col7a1Q63870 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col7a1Q63870 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col7a1Q63870 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Col7a1Q63870 Auts2-212ENSMUST00000178555 309 ntBASIC15.27■□□□□ 0.04
Col7a1Q63870 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col7a1Q63870 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col7a1Q63870 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.27■□□□□ 0.04
Col7a1Q63870 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col7a1Q63870 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col7a1Q63870 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.27■□□□□ 0.03
Col7a1Q63870 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col7a1Q63870 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Col7a1Q63870 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col7a1Q63870 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col7a1Q63870 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col7a1Q63870 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col7a1Q63870 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col7a1Q63870 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col7a1Q63870 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.26■□□□□ 0.03
Col7a1Q63870 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col7a1Q63870 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col7a1Q63870 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col7a1Q63870 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.26■□□□□ 0.03
Col7a1Q63870 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col7a1Q63870 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.26■□□□□ 0.03
Col7a1Q63870 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col7a1Q63870 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col7a1Q63870 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col7a1Q63870 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col7a1Q63870 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col7a1Q63870 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.25■□□□□ 0.03
Col7a1Q63870 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col7a1Q63870 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col7a1Q63870 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms