Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.35■□□□□ 0.37
Sema3bQ62177 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sema3bQ62177 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Sema3bQ62177 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.34■□□□□ 0.37
Sema3bQ62177 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.34■□□□□ 0.37
Sema3bQ62177 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.34■□□□□ 0.37
Sema3bQ62177 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.34■□□□□ 0.37
Sema3bQ62177 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sema3bQ62177 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sema3bQ62177 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sema3bQ62177 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Sema3bQ62177 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sema3bQ62177 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.33■□□□□ 0.37
Sema3bQ62177 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sema3bQ62177 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sema3bQ62177 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sema3bQ62177 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sema3bQ62177 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sema3bQ62177 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.33■□□□□ 0.36
Sema3bQ62177 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Sema3bQ62177 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.33■□□□□ 0.36
Sema3bQ62177 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sema3bQ62177 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.33■□□□□ 0.36
Sema3bQ62177 Rarb-207ENSMUST00000225921 2756 ntBASIC17.33■□□□□ 0.36
Sema3bQ62177 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sema3bQ62177 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.32■□□□□ 0.36
Sema3bQ62177 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Sema3bQ62177 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Gm13158-201ENSMUST00000122007 736 ntBASIC17.32■□□□□ 0.36
Sema3bQ62177 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.32■□□□□ 0.36
Sema3bQ62177 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.32■□□□□ 0.36
Sema3bQ62177 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.32■□□□□ 0.36
Sema3bQ62177 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sema3bQ62177 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.32■□□□□ 0.36
Sema3bQ62177 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sema3bQ62177 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sema3bQ62177 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
Sema3bQ62177 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.31■□□□□ 0.36
Sema3bQ62177 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sema3bQ62177 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.31■□□□□ 0.36
Sema3bQ62177 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.31■□□□□ 0.36
Sema3bQ62177 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sema3bQ62177 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.3■□□□□ 0.36
Sema3bQ62177 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.3■□□□□ 0.36
Sema3bQ62177 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.3■□□□□ 0.36
Sema3bQ62177 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sema3bQ62177 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.3■□□□□ 0.36
Sema3bQ62177 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sema3bQ62177 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.3■□□□□ 0.36
Sema3bQ62177 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sema3bQ62177 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sema3bQ62177 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sema3bQ62177 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms