Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd47Q61735 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Cd47Q61735 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.62■□□□□ 0.25
Cd47Q61735 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.62■□□□□ 0.25
Cd47Q61735 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd47Q61735 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.61■□□□□ 0.25
Cd47Q61735 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cd47Q61735 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.61■□□□□ 0.25
Cd47Q61735 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.61■□□□□ 0.25
Cd47Q61735 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Reep4-203ENSMUST00000226563 1444 ntBASIC16.61■□□□□ 0.25
Cd47Q61735 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd47Q61735 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd47Q61735 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd47Q61735 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.6■□□□□ 0.25
Cd47Q61735 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd47Q61735 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd47Q61735 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Cd47Q61735 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd47Q61735 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd47Q61735 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.6■□□□□ 0.25
Cd47Q61735 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd47Q61735 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cd47Q61735 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cd47Q61735 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cd47Q61735 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.59■□□□□ 0.25
Cd47Q61735 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cd47Q61735 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.59■□□□□ 0.25
Cd47Q61735 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.59■□□□□ 0.25
Cd47Q61735 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.59■□□□□ 0.25
Cd47Q61735 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.59■□□□□ 0.25
Cd47Q61735 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd47Q61735 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cd47Q61735 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cd47Q61735 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd47Q61735 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Cd47Q61735 Gm13146-201ENSMUST00000118508 780 ntBASIC16.58■□□□□ 0.24
Cd47Q61735 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cd47Q61735 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.58■□□□□ 0.24
Cd47Q61735 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd47Q61735 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.58■□□□□ 0.24
Cd47Q61735 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd47Q61735 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd47Q61735 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd47Q61735 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.58■□□□□ 0.24
Cd47Q61735 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd47Q61735 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd47Q61735 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd47Q61735 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd47Q61735 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cd47Q61735 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd47Q61735 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.57■□□□□ 0.24
Cd47Q61735 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.57■□□□□ 0.24
Cd47Q61735 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd47Q61735 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.57■□□□□ 0.24
Cd47Q61735 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd47Q61735 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.57■□□□□ 0.24
Cd47Q61735 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.57■□□□□ 0.24
Cd47Q61735 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Cd47Q61735 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cd47Q61735 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cd47Q61735 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cd47Q61735 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd47Q61735 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd47Q61735 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms