Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ecm1Q61508 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.35■□□□□ 0.85
Ecm1Q61508 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ecm1Q61508 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.35■□□□□ 0.85
Ecm1Q61508 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ecm1Q61508 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ecm1Q61508 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ecm1Q61508 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ecm1Q61508 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.34■□□□□ 0.85
Ecm1Q61508 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ecm1Q61508 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ecm1Q61508 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ecm1Q61508 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ecm1Q61508 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ecm1Q61508 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ecm1Q61508 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ecm1Q61508 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ecm1Q61508 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ecm1Q61508 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ecm1Q61508 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ecm1Q61508 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ecm1Q61508 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ecm1Q61508 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ecm1Q61508 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ecm1Q61508 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ecm1Q61508 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ecm1Q61508 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.32■□□□□ 0.84
Ecm1Q61508 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.32■□□□□ 0.84
Ecm1Q61508 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ecm1Q61508 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ecm1Q61508 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ecm1Q61508 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.31■□□□□ 0.84
Ecm1Q61508 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ecm1Q61508 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ecm1Q61508 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ecm1Q61508 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ecm1Q61508 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ecm1Q61508 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Mir2861-201ENSMUST00000175539 82 ntBASIC20.3■□□□□ 0.84
Ecm1Q61508 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.3■□□□□ 0.84
Ecm1Q61508 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ecm1Q61508 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.3■□□□□ 0.84
Ecm1Q61508 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.3■□□□□ 0.84
Ecm1Q61508 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ecm1Q61508 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ecm1Q61508 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ecm1Q61508 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.29■□□□□ 0.84
Ecm1Q61508 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ecm1Q61508 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ecm1Q61508 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ecm1Q61508 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ecm1Q61508 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Ecm1Q61508 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ecm1Q61508 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ecm1Q61508 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.28■□□□□ 0.84
Ecm1Q61508 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ecm1Q61508 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.28■□□□□ 0.84
Ecm1Q61508 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.28■□□□□ 0.84
Ecm1Q61508 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.28■□□□□ 0.84
Ecm1Q61508 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ecm1Q61508 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ecm1Q61508 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ecm1Q61508 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ecm1Q61508 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ecm1Q61508 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ecm1Q61508 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ecm1Q61508 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.27■□□□□ 0.84
Ecm1Q61508 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ecm1Q61508 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ecm1Q61508 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ecm1Q61508 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ecm1Q61508 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Ecm1Q61508 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms