Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.04■□□□□ 0.64
Smarcd1Q61466 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smarcd1Q61466 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Golph3-205ENSMUST00000228671 2842 ntBASIC19.03■□□□□ 0.64
Smarcd1Q61466 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Gm22240-201ENSMUST00000175225 82 ntBASIC19.03■□□□□ 0.64
Smarcd1Q61466 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Zfp783-201ENSMUST00000095946 670 ntBASIC19.03■□□□□ 0.64
Smarcd1Q61466 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smarcd1Q61466 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Smarcd1Q61466 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcd1Q61466 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smarcd1Q61466 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Gm18666-201ENSMUST00000190039 958 ntBASIC19.01■□□□□ 0.63
Smarcd1Q61466 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smarcd1Q61466 Dapk1-207ENSMUST00000226059 5009 ntBASIC19■□□□□ 0.63
Smarcd1Q61466 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Gm5643-201ENSMUST00000117081 966 ntBASIC19■□□□□ 0.63
Smarcd1Q61466 Gm13158-201ENSMUST00000122007 736 ntBASIC19■□□□□ 0.63
Smarcd1Q61466 Gm38285-201ENSMUST00000192928 922 ntBASIC19■□□□□ 0.63
Smarcd1Q61466 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19■□□□□ 0.63
Smarcd1Q61466 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smarcd1Q61466 Gm42922-201ENSMUST00000195887 2078 ntBASIC19■□□□□ 0.63
Smarcd1Q61466 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19■□□□□ 0.63
Smarcd1Q61466 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smarcd1Q61466 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smarcd1Q61466 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.98■□□□□ 0.63
Smarcd1Q61466 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd1Q61466 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd1Q61466 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd1Q61466 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd1Q61466 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd1Q61466 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd1Q61466 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smarcd1Q61466 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Iqck-206ENSMUST00000208658 2891 ntBASIC18.97■□□□□ 0.63
Smarcd1Q61466 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms