Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Gm12933-201ENSMUST00000120203 872 ntBASIC18.55■□□□□ 0.56
Sdf4Q61112 Gm6211-202ENSMUST00000167849 925 ntBASIC18.55■□□□□ 0.56
Sdf4Q61112 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.55■□□□□ 0.56
Sdf4Q61112 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.55■□□□□ 0.56
Sdf4Q61112 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.55■□□□□ 0.56
Sdf4Q61112 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.55■□□□□ 0.56
Sdf4Q61112 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Sdf4Q61112 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sdf4Q61112 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdf4Q61112 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdf4Q61112 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.54■□□□□ 0.56
Sdf4Q61112 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdf4Q61112 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.54■□□□□ 0.56
Sdf4Q61112 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdf4Q61112 Mir5133-201ENSMUST00000174955 77 ntBASIC18.54■□□□□ 0.56
Sdf4Q61112 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sdf4Q61112 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sdf4Q61112 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdf4Q61112 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdf4Q61112 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.54■□□□□ 0.56
Sdf4Q61112 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdf4Q61112 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sdf4Q61112 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdf4Q61112 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Sdf4Q61112 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdf4Q61112 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdf4Q61112 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdf4Q61112 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.52■□□□□ 0.56
Sdf4Q61112 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sdf4Q61112 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdf4Q61112 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdf4Q61112 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sdf4Q61112 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.52■□□□□ 0.56
Sdf4Q61112 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.52■□□□□ 0.56
Sdf4Q61112 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sdf4Q61112 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.52■□□□□ 0.56
Sdf4Q61112 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sdf4Q61112 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sdf4Q61112 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sdf4Q61112 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.52■□□□□ 0.55
Sdf4Q61112 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sdf4Q61112 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sdf4Q61112 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Sdf4Q61112 Gm22325-201ENSMUST00000158904 308 ntBASIC18.51■□□□□ 0.55
Sdf4Q61112 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sdf4Q61112 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Sdf4Q61112 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.5■□□□□ 0.55
Sdf4Q61112 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sdf4Q61112 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.49■□□□□ 0.55
Sdf4Q61112 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sdf4Q61112 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms