Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atp13a4Q5XF90 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atp13a4Q5XF90 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atp13a4Q5XF90 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Gm26524-201ENSMUST00000192339 390 ntBASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atp13a4Q5XF90 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Grk6-206ENSMUST00000224995 2971 ntBASIC19.71■□□□□ 0.75
Atp13a4Q5XF90 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atp13a4Q5XF90 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Gm10602-201ENSMUST00000098239 609 ntBASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp13a4Q5XF90 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp13a4Q5XF90 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atp13a4Q5XF90 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp13a4Q5XF90 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Atp13a4Q5XF90 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp13a4Q5XF90 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp13a4Q5XF90 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp13a4Q5XF90 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Atp13a4Q5XF90 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms