Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav7d-3Q5R1I1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-3Q5R1I1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Gm38205-201ENSMUST00000192243 258 ntBASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7d-3Q5R1I1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav7d-3Q5R1I1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms