Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav6d-4Q5R1I0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Flg-201ENSMUST00000050758 1488 ntBASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Gm22240-201ENSMUST00000175225 82 ntBASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav6d-4Q5R1I0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6d-4Q5R1I0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6d-4Q5R1I0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6d-4Q5R1I0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Gm11249-201ENSMUST00000117071 859 ntBASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav6d-4Q5R1I0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trav6d-4Q5R1I0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6d-4Q5R1I0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6d-4Q5R1I0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms