Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scarf1Q5ND28 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scarf1Q5ND28 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Scarf1Q5ND28 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scarf1Q5ND28 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scarf1Q5ND28 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.02■□□□□ 0.8
Scarf1Q5ND28 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scarf1Q5ND28 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scarf1Q5ND28 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Scarf1Q5ND28 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20■□□□□ 0.79
Scarf1Q5ND28 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Gm11249-201ENSMUST00000117071 859 ntBASIC20■□□□□ 0.79
Scarf1Q5ND28 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Scarf1Q5ND28 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Scarf1Q5ND28 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scarf1Q5ND28 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.98■□□□□ 0.79
Scarf1Q5ND28 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.98■□□□□ 0.79
Scarf1Q5ND28 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.98■□□□□ 0.79
Scarf1Q5ND28 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scarf1Q5ND28 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scarf1Q5ND28 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scarf1Q5ND28 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scarf1Q5ND28 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Gm11927-201ENSMUST00000118472 759 ntBASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scarf1Q5ND28 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Zfp783-201ENSMUST00000095946 670 ntBASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scarf1Q5ND28 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Scarf1Q5ND28 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Flg-201ENSMUST00000050758 1488 ntBASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Trmt13-210ENSMUST00000198454 880 ntBASIC19.95■□□□□ 0.78
Scarf1Q5ND28 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scarf1Q5ND28 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scarf1Q5ND28 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scarf1Q5ND28 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scarf1Q5ND28 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scarf1Q5ND28 Tgds-204ENSMUST00000228543 1594 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms