Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Gm43183-201ENSMUST00000200632 547 ntBASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf43Q5NCP0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Mtag2-201ENSMUST00000058665 714 ntBASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf43Q5NCP0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf43Q5NCP0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
Rnf43Q5NCP0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rnf43Q5NCP0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rnf43Q5NCP0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf43Q5NCP0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Gm18025-201ENSMUST00000221733 862 ntBASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rnf43Q5NCP0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Gm15375-201ENSMUST00000119510 849 ntBASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Odf3b-204ENSMUST00000227834 930 ntBASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rnf43Q5NCP0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Gm30025-201ENSMUST00000218555 728 ntBASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf43Q5NCP0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms