Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim41Q5NCC3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 Gm38285-201ENSMUST00000192928 922 ntBASIC31.77■■■□□ 2.68
Trim41Q5NCC3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Trim41Q5NCC3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Trim41Q5NCC3 Gm10138-203ENSMUST00000206952 366 ntBASIC31.76■■■□□ 2.67
Trim41Q5NCC3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC31.76■■■□□ 2.67
Trim41Q5NCC3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Trim41Q5NCC3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Trim41Q5NCC3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Trim41Q5NCC3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Trim41Q5NCC3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Trim41Q5NCC3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Trim41Q5NCC3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Trim41Q5NCC3 Gm30025-201ENSMUST00000218555 728 ntBASIC31.74■■■□□ 2.67
Trim41Q5NCC3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
Trim41Q5NCC3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Trim41Q5NCC3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Trim41Q5NCC3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Trim41Q5NCC3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Gm37805-201ENSMUST00000192612 1094 ntBASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trim41Q5NCC3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Trim41Q5NCC3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC31.72■■■□□ 2.67
Trim41Q5NCC3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Trim41Q5NCC3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Trim41Q5NCC3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Trim41Q5NCC3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Trim41Q5NCC3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Trim41Q5NCC3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Trim41Q5NCC3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Trim41Q5NCC3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Trim41Q5NCC3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
Trim41Q5NCC3 Gm14859-201ENSMUST00000117752 357 ntBASIC31.7■■■□□ 2.67
Trim41Q5NCC3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Trim41Q5NCC3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Trim41Q5NCC3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Trim41Q5NCC3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Trim41Q5NCC3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC31.69■■■□□ 2.66
Trim41Q5NCC3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Trim41Q5NCC3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Trim41Q5NCC3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Trim41Q5NCC3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC31.69■■■□□ 2.66
Trim41Q5NCC3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim41Q5NCC3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Trim41Q5NCC3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Trim41Q5NCC3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
Trim41Q5NCC3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Trim41Q5NCC3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Trim41Q5NCC3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Trim41Q5NCC3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Trim41Q5NCC3 Gm15375-201ENSMUST00000119510 849 ntBASIC31.66■■■□□ 2.66
Trim41Q5NCC3 Gm13559-201ENSMUST00000120476 863 ntBASIC31.66■■■□□ 2.66
Trim41Q5NCC3 Gm7889-201ENSMUST00000185591 958 ntBASIC31.66■■■□□ 2.66
Trim41Q5NCC3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
Trim41Q5NCC3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
Trim41Q5NCC3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Gm10013-201ENSMUST00000106074 672 ntBASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Gm43183-201ENSMUST00000200632 547 ntBASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Trim41Q5NCC3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Trim41Q5NCC3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC31.64■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms