Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clhc1Q5M6W3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Gm43173-201ENSMUST00000202246 593 ntBASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clhc1Q5M6W3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clhc1Q5M6W3 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clhc1Q5M6W3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Gm43017-201ENSMUST00000198296 752 ntBASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clhc1Q5M6W3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clhc1Q5M6W3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Clhc1Q5M6W3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clhc1Q5M6W3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clhc1Q5M6W3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clhc1Q5M6W3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clhc1Q5M6W3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Clhc1Q5M6W3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Smad6-203ENSMUST00000179458 273 ntBASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clhc1Q5M6W3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Gm11421-201ENSMUST00000122124 294 ntBASIC17.57■□□□□ 0.4
Clhc1Q5M6W3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms