Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps13aQ5H8C4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Gm6443-201ENSMUST00000203599 874 ntBASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Gm18669-201ENSMUST00000216049 778 ntBASIC18.24■□□□□ 0.51
Vps13aQ5H8C4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps13aQ5H8C4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Gm34391-201ENSMUST00000203706 907 ntBASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps13aQ5H8C4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps13aQ5H8C4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Vps13aQ5H8C4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Gm18115-201ENSMUST00000221209 621 ntBASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Mir5130-201ENSMUST00000175160 84 ntBASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.2■□□□□ 0.5
Vps13aQ5H8C4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps13aQ5H8C4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps13aQ5H8C4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps13aQ5H8C4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps13aQ5H8C4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps13aQ5H8C4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps13aQ5H8C4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps13aQ5H8C4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Gm12085-201ENSMUST00000119263 940 ntBASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Mzt1-203ENSMUST00000227948 952 ntBASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps13aQ5H8C4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms