Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Gm15039-201ENSMUST00000118914 875 ntBASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Gm22325-201ENSMUST00000158904 308 ntBASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Rnf20Q5DTM8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf20Q5DTM8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Gm6365-201ENSMUST00000054711 744 ntBASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf20Q5DTM8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rnf20Q5DTM8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf20Q5DTM8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.7■■□□□ 1.06
Rnf20Q5DTM8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf20Q5DTM8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.7■■□□□ 1.06
Rnf20Q5DTM8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Rnf20Q5DTM8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.7■■□□□ 1.06
Rnf20Q5DTM8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf20Q5DTM8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gm7290-201ENSMUST00000104990 617 ntBASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gm12918-201ENSMUST00000120234 636 ntBASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gm15710-201ENSMUST00000121821 636 ntBASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gm5075-201ENSMUST00000196916 622 ntBASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf20Q5DTM8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf20Q5DTM8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Gm27405-201ENSMUST00000184201 112 ntBASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf20Q5DTM8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms