Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
Pds5bQ4VA53 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
Pds5bQ4VA53 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Pds5bQ4VA53 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC32.18■■■□□ 2.74
Pds5bQ4VA53 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
Pds5bQ4VA53 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC32.18■■■□□ 2.74
Pds5bQ4VA53 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pds5bQ4VA53 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Gm7791-201ENSMUST00000219066 539 ntBASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Pds5bQ4VA53 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
Pds5bQ4VA53 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC32.15■■■□□ 2.74
Pds5bQ4VA53 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Pds5bQ4VA53 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pds5bQ4VA53 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pds5bQ4VA53 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC32.15■■■□□ 2.74
Pds5bQ4VA53 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC32.15■■■□□ 2.74
Pds5bQ4VA53 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC32.15■■■□□ 2.74
Pds5bQ4VA53 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
Pds5bQ4VA53 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Pds5bQ4VA53 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
Pds5bQ4VA53 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC32.14■■■□□ 2.74
Pds5bQ4VA53 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC32.14■■■□□ 2.74
Pds5bQ4VA53 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Pds5bQ4VA53 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC32.14■■■□□ 2.74
Pds5bQ4VA53 Gm4974-201ENSMUST00000209974 875 ntBASIC32.14■■■□□ 2.74
Pds5bQ4VA53 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pds5bQ4VA53 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pds5bQ4VA53 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Pds5bQ4VA53 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Pds5bQ4VA53 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC32.13■■■□□ 2.73
Pds5bQ4VA53 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pds5bQ4VA53 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Pds5bQ4VA53 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC32.12■■■□□ 2.73
Pds5bQ4VA53 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Pds5bQ4VA53 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Pds5bQ4VA53 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Pds5bQ4VA53 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC32.11■■■□□ 2.73
Pds5bQ4VA53 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC32.11■■■□□ 2.73
Pds5bQ4VA53 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC32.1■■■□□ 2.73
Pds5bQ4VA53 Gm9694-201ENSMUST00000193347 1189 ntBASIC32.1■■■□□ 2.73
Pds5bQ4VA53 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Pds5bQ4VA53 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
Pds5bQ4VA53 Spsb2-203ENSMUST00000112473 1322 ntBASIC32.1■■■□□ 2.73
Pds5bQ4VA53 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Pds5bQ4VA53 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Pds5bQ4VA53 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Pds5bQ4VA53 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Pds5bQ4VA53 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC32.09■■■□□ 2.73
Pds5bQ4VA53 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Gm27742-201ENSMUST00000184667 60 ntBASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
Pds5bQ4VA53 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Gm28659-201ENSMUST00000188013 759 ntBASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Pds5bQ4VA53 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Pds5bQ4VA53 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Pds5bQ4VA53 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Pds5bQ4VA53 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Pds5bQ4VA53 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Pds5bQ4VA53 Gm37805-201ENSMUST00000192612 1094 ntBASIC32.06■■■□□ 2.72
Pds5bQ4VA53 Gm11355-201ENSMUST00000121120 306 ntBASIC32.05■■■□□ 2.72
Pds5bQ4VA53 Birc2-201ENSMUST00000054878 378 ntBASIC32.05■■■□□ 2.72
Pds5bQ4VA53 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Pds5bQ4VA53 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pds5bQ4VA53 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pds5bQ4VA53 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms