Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx49Q4FZF3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx49Q4FZF3 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx49Q4FZF3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Gm15375-201ENSMUST00000119510 849 ntBASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Odf3b-204ENSMUST00000227834 930 ntBASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx49Q4FZF3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Gm37292-201ENSMUST00000192062 758 ntBASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx49Q4FZF3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Gm3375-201ENSMUST00000203929 796 ntBASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ddx49Q4FZF3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ddx49Q4FZF3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Timm23-208ENSMUST00000226683 750 ntBASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ddx49Q4FZF3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx49Q4FZF3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ddx49Q4FZF3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ddx49Q4FZF3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx49Q4FZF3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx49Q4FZF3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ddx49Q4FZF3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms