Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nlrc4Q3UP24 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nlrc4Q3UP24 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Gm2399-201ENSMUST00000104944 225 ntBASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nlrc4Q3UP24 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Gm12896-201ENSMUST00000118430 226 ntBASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Dio3-201ENSMUST00000097228 1449 ntBASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nlrc4Q3UP24 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Gm2559-201ENSMUST00000201323 363 ntBASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nlrc4Q3UP24 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Gm10653-202ENSMUST00000139570 835 ntBASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nlrc4Q3UP24 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Gm27011-201ENSMUST00000182352 972 ntBASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Gm27275-201ENSMUST00000184318 272 ntBASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Gm37856-201ENSMUST00000191634 999 ntBASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nlrc4Q3UP24 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nlrc4Q3UP24 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms