Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.6□□□□□ -0.39
Cops9Q3U898 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cops9Q3U898 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.6□□□□□ -0.39
Cops9Q3U898 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops9Q3U898 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cops9Q3U898 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cops9Q3U898 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.59□□□□□ -0.39
Cops9Q3U898 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cops9Q3U898 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.59□□□□□ -0.39
Cops9Q3U898 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops9Q3U898 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.59□□□□□ -0.39
Cops9Q3U898 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.59□□□□□ -0.39
Cops9Q3U898 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cops9Q3U898 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cops9Q3U898 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.58□□□□□ -0.4
Cops9Q3U898 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC12.58□□□□□ -0.4
Cops9Q3U898 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cops9Q3U898 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.58□□□□□ -0.4
Cops9Q3U898 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops9Q3U898 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cops9Q3U898 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cops9Q3U898 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.57□□□□□ -0.4
Cops9Q3U898 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops9Q3U898 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.57□□□□□ -0.4
Cops9Q3U898 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.57□□□□□ -0.4
Cops9Q3U898 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cops9Q3U898 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Cops9Q3U898 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cops9Q3U898 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cops9Q3U898 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.56□□□□□ -0.4
Cops9Q3U898 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Fst-202ENSMUST00000223640 2612 ntBASIC12.56□□□□□ -0.4
Cops9Q3U898 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Etf1-202ENSMUST00000180351 108 ntBASIC12.56□□□□□ -0.4
Cops9Q3U898 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cops9Q3U898 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cops9Q3U898 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms