Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd8Q09XV5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd8Q09XV5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chd8Q09XV5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd8Q09XV5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chd8Q09XV5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.45■□□□□ 0.22
Chd8Q09XV5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chd8Q09XV5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chd8Q09XV5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.43■□□□□ 0.22
Chd8Q09XV5 Rps4l-201ENSMUST00000071745 943 ntBASIC16.43■□□□□ 0.22
Chd8Q09XV5 Zfp783-201ENSMUST00000095946 670 ntBASIC16.43■□□□□ 0.22
Chd8Q09XV5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Gm15467-201ENSMUST00000120582 445 ntBASIC16.43■□□□□ 0.22
Chd8Q09XV5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chd8Q09XV5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chd8Q09XV5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chd8Q09XV5 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.41■□□□□ 0.22
Chd8Q09XV5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Gm12085-201ENSMUST00000119263 940 ntBASIC16.4■□□□□ 0.22
Chd8Q09XV5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Mir1668-201ENSMUST00000184114 107 ntBASIC16.4■□□□□ 0.22
Chd8Q09XV5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.4■□□□□ 0.22
Chd8Q09XV5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.4■□□□□ 0.22
Chd8Q09XV5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Chd8Q09XV5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms