Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox4Q06831 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sox4Q06831 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox4Q06831 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sox4Q06831 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.95■□□□□ 0.46
Sox4Q06831 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.95■□□□□ 0.46
Sox4Q06831 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sox4Q06831 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.94■□□□□ 0.46
Sox4Q06831 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.94■□□□□ 0.46
Sox4Q06831 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.94■□□□□ 0.46
Sox4Q06831 Gm2559-201ENSMUST00000201323 363 ntBASIC17.94■□□□□ 0.46
Sox4Q06831 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sox4Q06831 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox4Q06831 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox4Q06831 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox4Q06831 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.93■□□□□ 0.46
Sox4Q06831 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox4Q06831 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Gm2399-201ENSMUST00000104944 225 ntBASIC17.93■□□□□ 0.46
Sox4Q06831 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sox4Q06831 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Sox4Q06831 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.93■□□□□ 0.46
Sox4Q06831 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sox4Q06831 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.92■□□□□ 0.46
Sox4Q06831 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Gm27275-201ENSMUST00000184318 272 ntBASIC17.92■□□□□ 0.46
Sox4Q06831 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.92■□□□□ 0.46
Sox4Q06831 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.92■□□□□ 0.46
Sox4Q06831 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sox4Q06831 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.91■□□□□ 0.46
Sox4Q06831 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.91■□□□□ 0.46
Sox4Q06831 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.91■□□□□ 0.46
Sox4Q06831 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.91■□□□□ 0.46
Sox4Q06831 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.91■□□□□ 0.46
Sox4Q06831 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.91■□□□□ 0.46
Sox4Q06831 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox4Q06831 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox4Q06831 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.9■□□□□ 0.46
Sox4Q06831 Gm37856-201ENSMUST00000191634 999 ntBASIC17.9■□□□□ 0.46
Sox4Q06831 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.9■□□□□ 0.46
Sox4Q06831 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox4Q06831 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox4Q06831 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox4Q06831 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox4Q06831 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Sox4Q06831 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.89■□□□□ 0.45
Sox4Q06831 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.89■□□□□ 0.45
Sox4Q06831 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sox4Q06831 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Sox4Q06831 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.89■□□□□ 0.45
Sox4Q06831 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox4Q06831 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms