Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Gm11927-201ENSMUST00000118472 759 ntBASIC13.59□□□□□ -0.23
Hspg2Q05793 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.59□□□□□ -0.23
Hspg2Q05793 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Hspg2Q05793 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hspg2Q05793 Gm37292-201ENSMUST00000192062 758 ntBASIC13.59□□□□□ -0.23
Hspg2Q05793 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Hspg2Q05793 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.59□□□□□ -0.23
Hspg2Q05793 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Hspg2Q05793 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.58□□□□□ -0.24
Hspg2Q05793 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
Hspg2Q05793 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.58□□□□□ -0.24
Hspg2Q05793 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hspg2Q05793 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Hspg2Q05793 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.58□□□□□ -0.24
Hspg2Q05793 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hspg2Q05793 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Hspg2Q05793 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hspg2Q05793 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Hspg2Q05793 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.57□□□□□ -0.24
Hspg2Q05793 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hspg2Q05793 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.57□□□□□ -0.24
Hspg2Q05793 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Hspg2Q05793 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.57□□□□□ -0.24
Hspg2Q05793 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hspg2Q05793 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Hspg2Q05793 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Hspg2Q05793 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
Hspg2Q05793 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.56□□□□□ -0.24
Hspg2Q05793 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Gm18959-201ENSMUST00000208954 655 ntBASIC13.56□□□□□ -0.24
Hspg2Q05793 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hspg2Q05793 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hspg2Q05793 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hspg2Q05793 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Gm28033-201ENSMUST00000184224 96 ntBASIC13.55□□□□□ -0.24
Hspg2Q05793 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Timm23-208ENSMUST00000226683 750 ntBASIC13.55□□□□□ -0.24
Hspg2Q05793 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Hspg2Q05793 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hspg2Q05793 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hspg2Q05793 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hspg2Q05793 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hspg2Q05793 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hspg2Q05793 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Hspg2Q05793 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.54□□□□□ -0.24
Hspg2Q05793 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hspg2Q05793 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.54□□□□□ -0.24
Hspg2Q05793 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hspg2Q05793 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.53□□□□□ -0.24
Hspg2Q05793 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.53□□□□□ -0.24
Hspg2Q05793 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hspg2Q05793 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.53□□□□□ -0.24
Hspg2Q05793 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hspg2Q05793 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hspg2Q05793 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hspg2Q05793 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hspg2Q05793 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hspg2Q05793 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hspg2Q05793 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hspg2Q05793 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.52□□□□□ -0.24
Hspg2Q05793 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.52□□□□□ -0.24
Hspg2Q05793 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Hspg2Q05793 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
Hspg2Q05793 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.52□□□□□ -0.25
Hspg2Q05793 Gm45058-201ENSMUST00000205810 766 ntBASIC13.52□□□□□ -0.25
Hspg2Q05793 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms