Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
H3f3aP84244 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
H3f3aP84244 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.25■□□□□ 0.19
H3f3aP84244 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
H3f3aP84244 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
H3f3aP84244 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.25■□□□□ 0.19
H3f3aP84244 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.25■□□□□ 0.19
H3f3aP84244 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.25■□□□□ 0.19
H3f3aP84244 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H3f3aP84244 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H3f3aP84244 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.24■□□□□ 0.19
H3f3aP84244 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.24■□□□□ 0.19
H3f3aP84244 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.24■□□□□ 0.19
H3f3aP84244 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.24■□□□□ 0.19
H3f3aP84244 Gm4968-201ENSMUST00000071458 858 ntBASIC16.24■□□□□ 0.19
H3f3aP84244 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
H3f3aP84244 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H3f3aP84244 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
H3f3aP84244 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
H3f3aP84244 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.23■□□□□ 0.19
H3f3aP84244 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
H3f3aP84244 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.22■□□□□ 0.19
H3f3aP84244 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
H3f3aP84244 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
H3f3aP84244 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.22■□□□□ 0.19
H3f3aP84244 Gm44549-201ENSMUST00000208351 577 ntBASIC16.22■□□□□ 0.19
H3f3aP84244 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.22■□□□□ 0.19
H3f3aP84244 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
H3f3aP84244 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3aP84244 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3aP84244 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.21■□□□□ 0.19
H3f3aP84244 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.21■□□□□ 0.19
H3f3aP84244 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.21■□□□□ 0.19
H3f3aP84244 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.21■□□□□ 0.19
H3f3aP84244 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.21■□□□□ 0.19
H3f3aP84244 Gm5408-201ENSMUST00000197998 747 ntBASIC16.21■□□□□ 0.19
H3f3aP84244 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.21■□□□□ 0.19
H3f3aP84244 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.21■□□□□ 0.19
H3f3aP84244 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3aP84244 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3aP84244 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.21■□□□□ 0.19
H3f3aP84244 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3aP84244 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
H3f3aP84244 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
H3f3aP84244 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
H3f3aP84244 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.21■□□□□ 0.18
H3f3aP84244 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
H3f3aP84244 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.2■□□□□ 0.18
H3f3aP84244 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.2■□□□□ 0.18
H3f3aP84244 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.2■□□□□ 0.18
H3f3aP84244 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
H3f3aP84244 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H3f3aP84244 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3aP84244 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3aP84244 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H3f3aP84244 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms